Browse of TCMCG007C25367 protein

CDS

Accession Number	TCMCG007C25367
gbkey	CDS
Protein Id	XP_009138862.1
Location	complement(join(1200993..1201323,1201406..1201600,1202034..1204666,1204760..1206010,1206138..1206194,1206285..1206349,1206436..1206561,1206642..1206763,1206836..1207026))
Gene	LOC103862900
GeneID	103862900
Organism	Brassica rapa

Protein

Length	1656aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009140614.3
Definition	eukaryotic translation initiation factor 4G isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	J
Description	eukaryotic translation initiation factor
KEGG_TC	-
KEGG_Module	M00428        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03012        [VIEW IN KEGG] ko03019        [VIEW IN KEGG]
KEGG_ko	ko:K03260        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] ko05416        [VIEW IN KEGG] map03013        [VIEW IN KEGG] map05416        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009605        [VIEW IN EMBL-EBI] GO:0009607        [VIEW IN EMBL-EBI] GO:0009615        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009737        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0033993        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043207        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051707        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:0097305        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTCCTACAACCAACCACGCCCCTCCGATAATCAACAATATCGGCGAACTGGGCGATCCGCCGGCTACCAACAGCAGCAGCAGCAGCAACAGCCGCACCGATCTTCCGCCGCCGGTTACGGAAGGGGAGCCGGAGCCGGCGCCGGACCTGCTCCCGCCTCTTCCGCTACTGTCGATCCCTCTAATCGCAGTTTTAAGAAGGCTCAAGGAGGAGGGCAGCAGCATCAGCATCAGCCTAGGGTGAATCTGCCTCCTGTGAATCATCATTCAAACAATCACAACGGTCCTCCCAATGTACAATCTCGCTCTCAAGGAGCGTCTGGTGAACCGGTTATTGGTGGACCGGGGAATTCTATTAGTGGAGCTATTCCAAAGGCTCCAACTTCGCAGTCTCCTGCTGTGAATTCCAAGAGCAATGAGGCTCAGAACACAGCTAAACTCTCTGGAGACCCTTCTAAAGCGTTTGCTTTTCAGTTTGGGTCACTTGGTCCTGATTTGATGAAGATTCCTGCTCGAACTAGCTCAGCGCCTCCTAATATGGATGAGCAGAAACGTGCACAGATGCAGCAAGCTTCTTTAAAAGCAGCACCGAACGTGCCAGTTTCTGTACCGAAAAATAACTCTCCAAATAAGGCTGCAGATAATCAAGTGATGCGGAAAGAGGGGCGCAATCCGTCAAGCGATAAAGCAGATGTGCAAGTCCATCATATGTCCCCTCTAAGCCAAACGCATAAGTCTCCAATTACGCATATCCGGATGCCTTCCGTCCAGACACCTTATCAGCAGCATCCGCAGGTTCCTCACCCTGTGCATTTCGGTGCCCCGCCGAATATGCACATGCAGCCTCCCAATGTGGCTCCAACCTCATTTCAGATGCCAATGCCTATGGGGTTACCTATGGGAAACACACCTCAGATCCAGCAGCAAGTGTTTTTTCAAGGTCTCCCATCGCACCCCATGCACCATCAGGGTATGATGCATCAGGCGCAGGGACATGGTTTTGCGGCTCCAATGGGTGCTCAGATTCATCCTCAGATGGGCCACGTGGGTGTGGGTATGAGCCCGCAATATCCCCAGCAGCAAGGAGGGAAATATGGTGGGGGACGTAAGACAACACCCGTCAAGATTACACATCCCGACACGCATGAAGAGCTGAGACTTGGTGGACGCGGTGACCCGCATCAAGATGGCCAACCACAAGGTCCTAAATCGCATCCTAACACACCTCCCAGATCACATCCAGTGTCAGCATTTGCTCCACGACCACTTAATGTTATTCAAACCTCTTTTAACACCAGTCCCATGATATACCCTCCAGCTTCTGTACCCTTCAACAGTGGTCCAATGTCATCCGCTCAGGCACCAAGATTTCAATTTCCAGTTGTTGATGGGTCTCAGAGGGTACAGTTTACCAACCAATCTGCTCACACTGCTCCACATGTTTCATCTGATTCTTCATCTGTGAAAGCACATGTGACATCATCTGCTTTCCCTGCACCTGGGAGGGTAACAGTGAAGCAAGCTGCTACTTCTGAAAAGCTTGAATCACCTAAAGCCAGGTCACATGAAGAAACTAACGTTGCTCTGTCACAAAAGAAGGCCGAGACAGGTTTATTGGACTCTTTACAGCAGCCGAAACCTGGCTCTGTCTCCGCATTATCAAACTCGTCTGCTCCACCAGCAAAGGCACCTGTGGAGACTGTCACAGTTGCAACAACTACGATCGGAAGTGTGCAAATTGTGAATGAGTCGAGTTCAGTTGAAGATCAAACACAGACGTGTAAGGTGGAACCCTCTCATAATGCAACTGAGGTTCATGGACAGACTCCTGTATCTGATCTCGAAACAAAAGCCATTGCTGCTAAGGAAAATTCACGACTTCCAGCTACCAATGGGCTTGAGAAGCAAAACGTTCCAGCTTCTGACGCACCAGATACAAAAATTGACAAAACTGCGGAAGACCTAAACTGTGATGAGCGGACTATTTCAGGAAAGCAAGTTGAAGAGTCTGTAATTTCTGATGAGAAACTCGAAACAGTATCAGGCGTGCTTGAGAAGGCGCATAATGAGGTGGATGGTGCCACAGACATAAGTTCCGACTCTGAGAAAGTAGCTAAAGTTGCAGATGATACAAACTCCGAGCTTCCACATTCTACTCATACTCAGTCATCTACGGTTCCTGTTGGACATTCTAGTAATAGTTTGACATCTGCCCCAGCTTCTCTTTCCAAGGATAAACCTGCTTTTGAATCGAACATAAGAAGAACTACGTCTACCAAAGGAAGGAAGAAAATAAAAGAAATTTATCAGAAAGCAGATGCTGCGGGGACAACTGCTGATCTCTATATGGCTTATAAAGGGCCTGAGGAGAAGAAAGAGATTGCAATGCCTTCGGAGAGCTCTGACGTTTCAAACGAGAAGCTGGCACCTGCCATACCTCAGGATGTTGTTGAGGCCACCATGGATGCTGAACCGGTGAAAAATGAACCGGAAAACTGGGAAGATGCAGCTGATGTTTCCACACCAAAGCTGGAAAGTGTGCAGGGAAAGCCAGGTTCCGCAGATGAGGTCAGAGACGGCTGCAGTAATACGGAAAAGAAATACTCCCGCGATTTCCTCCTTAAGTTTGCAGACATGTTTACTGCTCTTCCTGAGGGCTTTGACGTTTCGCCTGATATTGCTAACGCCTTGATCTTTGTTAATACGGGTGCGCCTCATCATGAACATGGAAAGGTTATGGATCGGCAAGGTAGTAGTGGTCGACGTCCCAGCAATATGATTGATGATAGGTGGGCGAAGAATCAGGGTTCTCTTCCCTCAGGACATGGAGGTAACGCAGGTTTCCGAACTGGCCAAGGAGGAAACTCAGGAGTTCTAAGAAACCCTCGTATGCAGCAGGGACCGATTATGTCTAGACCGATGCAACCTGTGGGTCAGATGGGAGGAATGGGCAGAAACAACGACTTAGACAGGTGGCAACGAGGTTCAAATTTCCAACAGAAAGGACTTTTTCCTTCTCCGCATACTCCTATGCAGGTGATGCACAGAGCTGAGAGAAAATACCAAGTTGGTACTGTTACAGATGAAGAACAGGCAAAGCAAAGGCAGTTAAAGGGCATCTTGAACAAGCTGACTCCACAAAACTTTGAGAAGCTGTTTGAGCAAGTTAAAAATGTCAATATTGACAACGTTGTTACGCTTACTGGTGTTATCTCACAGATATTTGACAAAGCTTTGATGGAGCCTACCTTCTGTGAGATGTATGCAGATTTCTGTGTACATCTGTCTGGGGCGTTACCTGAATTAAATGAGGACGGTGAGAAGGTTACCTTCAAAAGATTGCTACTCAATAAGTGTCAGGAGGAATTTGAAAGAGGAGAGAAAGAAGAGGAAGAAGCCAGTAGAGTTGCCGAAGAAGGACAAGTAGAACAAACTGAGGAGGAGAGGGAAGAGAAGAGACTCAAAGTGCGGAGGAGAATGCTCGGTAATATTAGACTTATTGGTGAGTTATACAAGAAAAGGATGTTGACTGAGAAGATCATGCACGCATGCATCCAAAAATTGCTCGGGTATGATCAGGATCCACATGAAGAGAACATTGAAGCTCTGTGTAAACTAATGAGTACGATAGGAGTTATGATCGATCATAGCAAAGCTAAGGTCCATATAGATGCATATTTTGACAGAATGAAGATGCTATCAGGCAAAGAAGAATTGTCTTCTAGGGTGAGGTTCATGTTAATTAATGCCATCGATCTGAGAAAGAACAAATGGCAGGAGAGAATGAAGGTTGAAGGGCCAAAGAAAATAGAGGAAGTGCACAGAGATGCTGCACAAGAACGCCAAACTCAAGCTAAGAGGCTTTCACGTGGACCCTCAATGAATGTGTCAGGAAGAAGAGGGCATATGGAGTATAGTCCTAGGGGAGGAGGAGGAATGCTGTCACCTCCGAGTGCCCAAATGGGTGGTTATCATGGACCATCCCAAGGTCGTGGCTATAATAATAACCAGGACATTAGATTTGATGAAAGGTCAGCTCCCGCCTATGAGCCTAGGATGGTTCCAATGTCTCAAAGGTCAGTAGGTGAGGAGCCTATTACCTTGGGCCCTCAAGGTGGTCTTGGTCAAGGAATGTCGTTTAGAAAGCCTGCAGTATTGTCAAATACTCTGCAGTCTGATCCTAGGCGACCAGCTGGAGGTTTGAATGGTGTTGGCTCACAAAGACCTGCAAGTCCTGTTACTCACGGACGGTCAAGTCCTCAAGAGCGGGGATCAACTTATGTTCACAGGGAGTTTTCTCGTGCTTCTGAGCCGTCATCAGAAGTGTCATCTGCTAGGCAAGTACCGCAAGGACCATCGTCAGCAGTAAACAGCCCTCGAGAAAATTTGTTGTCCGAGGAACGGTTACAAGATATGTCCTTGTCTGCCATTAAGGAATATTACAGTGCCCGAGATGAGAAGGAGATTGGTTTATGCATGAAAGACATAAATTCACCAGCTTTCCACCCAACAATGATTTCTCTGTGGGTTACTGATTCTTTCGAGAGAAAAGACAAAGAAAGAGATCTCTTGGCAAAGCTCCTTGTTAACCTTGTGAAATCTGCTGACAACGTCTTAACCGAAGCCCAACTAGTGAAAGGGTTTGAAACTGTTTTGACAACCCTGGAGGATGCTGTGAATGATGCTCCGAAAGCAGCAGAGTTTCTAGGAAAAATCTTTGGTAAAAGTGTGACAGAGAAAGTAGTGACATTGGCAGAGATTGGTCGGTTAATACGTGAAGGAGGAGAAGAACCAGGAAGTCTGATGGAGTTTGGGTTAGGAGGTGATGTTCTTGGGAGTGTTTTGGAGACAATAAAGTCAGAAGCAGGAGAAGAAGCTTTTGTTGAGATTCACAAGAGCTCAGGTCTGAGGATTGAAGATTTCAAACCTCCTGCACCTAACCGGTCTAAGATTTTAGATAAATTTACTTAG

Protein:   MSYNQPRPSDNQQYRRTGRSAGYQQQQQQQQPHRSSAAGYGRGAGAGAGPAPASSATVDPSNRSFKKAQGGGQQHQHQPRVNLPPVNHHSNNHNGPPNVQSRSQGASGEPVIGGPGNSISGAIPKAPTSQSPAVNSKSNEAQNTAKLSGDPSKAFAFQFGSLGPDLMKIPARTSSAPPNMDEQKRAQMQQASLKAAPNVPVSVPKNNSPNKAADNQVMRKEGRNPSSDKADVQVHHMSPLSQTHKSPITHIRMPSVQTPYQQHPQVPHPVHFGAPPNMHMQPPNVAPTSFQMPMPMGLPMGNTPQIQQQVFFQGLPSHPMHHQGMMHQAQGHGFAAPMGAQIHPQMGHVGVGMSPQYPQQQGGKYGGGRKTTPVKITHPDTHEELRLGGRGDPHQDGQPQGPKSHPNTPPRSHPVSAFAPRPLNVIQTSFNTSPMIYPPASVPFNSGPMSSAQAPRFQFPVVDGSQRVQFTNQSAHTAPHVSSDSSSVKAHVTSSAFPAPGRVTVKQAATSEKLESPKARSHEETNVALSQKKAETGLLDSLQQPKPGSVSALSNSSAPPAKAPVETVTVATTTIGSVQIVNESSSVEDQTQTCKVEPSHNATEVHGQTPVSDLETKAIAAKENSRLPATNGLEKQNVPASDAPDTKIDKTAEDLNCDERTISGKQVEESVISDEKLETVSGVLEKAHNEVDGATDISSDSEKVAKVADDTNSELPHSTHTQSSTVPVGHSSNSLTSAPASLSKDKPAFESNIRRTTSTKGRKKIKEIYQKADAAGTTADLYMAYKGPEEKKEIAMPSESSDVSNEKLAPAIPQDVVEATMDAEPVKNEPENWEDAADVSTPKLESVQGKPGSADEVRDGCSNTEKKYSRDFLLKFADMFTALPEGFDVSPDIANALIFVNTGAPHHEHGKVMDRQGSSGRRPSNMIDDRWAKNQGSLPSGHGGNAGFRTGQGGNSGVLRNPRMQQGPIMSRPMQPVGQMGGMGRNNDLDRWQRGSNFQQKGLFPSPHTPMQVMHRAERKYQVGTVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKNVNIDNVVTLTGVISQIFDKALMEPTFCEMYADFCVHLSGALPELNEDGEKVTFKRLLLNKCQEEFERGEKEEEEASRVAEEGQVEQTEEEREEKRLKVRRRMLGNIRLIGELYKKRMLTEKIMHACIQKLLGYDQDPHEENIEALCKLMSTIGVMIDHSKAKVHIDAYFDRMKMLSGKEELSSRVRFMLINAIDLRKNKWQERMKVEGPKKIEEVHRDAAQERQTQAKRLSRGPSMNVSGRRGHMEYSPRGGGGMLSPPSAQMGGYHGPSQGRGYNNNQDIRFDERSAPAYEPRMVPMSQRSVGEEPITLGPQGGLGQGMSFRKPAVLSNTLQSDPRRPAGGLNGVGSQRPASPVTHGRSSPQERGSTYVHREFSRASEPSSEVSSARQVPQGPSSAVNSPRENLLSEERLQDMSLSAIKEYYSARDEKEIGLCMKDINSPAFHPTMISLWVTDSFERKDKERDLLAKLLVNLVKSADNVLTEAQLVKGFETVLTTLEDAVNDAPKAAEFLGKIFGKSVTEKVVTLAEIGRLIREGGEEPGSLMEFGLGGDVLGSVLETIKSEAGEEAFVEIHKSSGLRIEDFKPPAPNRSKILDKFT